STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCJAP00000070384Chromo domain-containing protein. (146 aa)    
Predicted Functional Partners:
LOC100394455
Histone H3; Belongs to the histone H3 family.
   
 0.724
SUV39H1
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
   
 0.698
SUV39H2
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
   
0.654
SGO1
Shugoshin 1.
    
 
 0.648
EHMT2
Euchromatic histone lysine methyltransferase 2.
    
 0.645
TRIM28
Tripartite motif containing 28.
    
 0.636
EMSY
EMSY transcriptional repressor, BRCA2 interacting.
    
 
 0.586
MBTD1
MBT domain-containing protein 1.
    
 0.573
RING1
E3 ubiquitin-protein ligase RING1.
    
 0.573
L3MBTL2
L3MBTL histone methyl-lysine binding protein 2.
    
 0.573
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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