STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TEFThyrotroph embryonic factor isoform 1. (308 aa)    
Predicted Functional Partners:
PER3
PAS domain-containing protein.
   
 0.754
PER2
Period circadian regulator 2.
   
 0.664
NR1D2
Nuclear receptor subfamily 1 group D member 2 isoform 1.
   
 0.612
LOC100401281
Uncharacterized protein.
   
 0.589
COX5A
Uncharacterized protein.
   
 0.589
DBP
D-box binding PAR bZIP transcription factor.
  
 
0.579
PITPNB
Phosphatidylinositol transfer protein beta.
      
 0.573
D4S234E
Uncharacterized protein.
      
 0.569
COX5B
Cytochrome c oxidase subunit 5B.
   
 0.569
ETNK1
Ethanolamine kinase 1.
   
  
 0.569
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.