STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC127Coiled-coil domain-containing protein 127. (260 aa)    
Predicted Functional Partners:
SUPT7L
SPT7 like, STAGA complex gamma subunit.
   
  
 0.673
MTO1
Mitochondrial tRNA translation optimization 1.
      
 0.645
FAM104A
Uncharacterized protein.
      
 0.645
ASB7
Ankyrin repeat and SOCS box protein 7 isoform 2.
      
 0.618
TADA2B
Transcriptional adapter.
      
 0.556
CNOT10
CCR4-NOT transcription complex subunit 10.
      
 0.539
AARS1
AA_TRNA_LIGASE_II_ALA domain-containing protein; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.
      
 0.523
ATP6V1FNB
ATP6V1F neighbor.
      
 0.520
CFAP61
Cilia and flagella associated protein 61.
      
 0.485
CST11
Cystatin 11.
      
 0.475
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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