STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATP10APhoLip_ATPase_N domain-containing protein. (152 aa)    
Predicted Functional Partners:
MAGEL2
MAGE family member L2.
    
 
 0.795
UBE3A
Ubiquitin-protein ligase E3A; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and transfers it to its substrates.
 
  
 
 0.739
F7DGV5_CALJA
Small nuclear ribonucleoprotein-associated protein.
      
 0.693
GABRB3
Gamma-aminobutyric acid type A receptor beta3 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
  
 0.690
SNRPN
Small nuclear ribonucleoprotein-associated protein.
      
 0.690
PEG3
Paternally expressed 3.
    
 0.642
ENSCJAP00000057547
Uncharacterized protein.
      
 0.620
TMEM30A
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
   
 0.615
TMEM30B
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
   
 0.572
F7B2R3_CALJA
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
   
 0.566
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.