STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NID2Nidogen 2. (1405 aa)    
Predicted Functional Partners:
HSPG2
Heparan sulfate proteoglycan 2.
   
 0.910
LAMC1
Laminin subunit gamma-1.
   
 0.857
LAMA4
Laminin subunit alpha-4 isoform 1.
   
 0.719
LAMC3
Laminin subunit gamma 3.
   
 0.714
AGRN
Agrin.
   
 0.700
FN1
Fibronectin isoform 1 preproprotein.
   
 
 0.684
LAMA2
Uncharacterized protein.
   
 0.626
LAMC2
Laminin subunit gamma 2.
   
 0.611
LAMA3
Laminin subunit alpha 3.
   
 0.610
LAMB2
Laminin subunit beta 2.
   
 0.606
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.