STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCNPPEST proteolytic signal-containing nuclear protein. (178 aa)    
Predicted Functional Partners:
KLHL2
Kelch like family member 2.
      
 0.901
TULP4
Tubby-related protein 4 isoform 1.
      
 0.897
HECW2
HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2.
      
 0.778
MYCBP2
MYC binding protein 2.
      
 0.775
UBE3C
Ubiquitin-protein ligase E3C.
      
 0.774
POLI
DNA polymerase iota.
      
 0.677
UHRF2
Ubiquitin like with PHD and ring finger domains 2.
    
 
 0.480
PTGES3
Prostaglandin E synthase 3.
   
    0.416
ENSCJAP00000073695
Uncharacterized protein.
   
    0.416
DNPH1
2'-deoxynucleoside 5'-phosphate N-hydrolase 1; Catalyzes the cleavage of the N-glycosidic bond of deoxyribonucleoside 5'-monophosphates to yield deoxyribose 5-phosphate and a purine or pyrimidine base. Deoxyribonucleoside 5'-monophosphates containing purine bases are preferred to those containing pyrimidine bases.
      
 0.400
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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