STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7H1orf158Uncharacterized protein C1orf158. (194 aa)    
Predicted Functional Partners:
EFHB
EF-hand domain family member B.
   
   0.802
CDC20B
Cell division cycle 20B.
   
    0.797
C1orf194
Chromosome 1 open reading frame 194.
   
   0.769
C1orf189
Chromosome 1 open reading frame 189.
    
   0.750
C9orf135
Chromosome 9 open reading frame 135.
    
   0.750
SPAG8
Sperm associated antigen 8.
    
   0.750
PACRG
Parkin coregulated.
   
 
 0.661
CFAP126
Uncharacterized protein.
   
   0.648
LOC100409364
Uncharacterized protein.
   
   0.648
CFAP52
Cilia and flagella associated protein 52.
   
 
 0.647
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.