STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HEATR3HEAT repeat-containing protein 3. (680 aa)    
Predicted Functional Partners:
RPF2
Ribosome production factor 2 homolog.
   
 
 0.643
GRWD1
Glutamate-rich WD repeat-containing protein 1.
   
  
 0.603
PSMD4
26S proteasome non-ATPase regulatory subunit 4.
      
 0.588
C10H14orf119
Uncharacterized protein C14orf119.
   
  
 0.563
RPL11
60S ribosomal protein L11 isoform 1; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.544
ENSCJAP00000072852
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.544
GTDC1
Glycosyltransferase like domain containing 1.
      
 0.535
CA7
Carbonic anhydrase 7 isoform 1; Belongs to the alpha-carbonic anhydrase family.
 
    
 0.525
ZNF592
Zinc finger protein 592.
      
 0.516
TENT4B
Terminal nucleotidyltransferase 4B.
 
 
  
 0.491
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.