STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCJAP00000072537SAM domain-containing protein. (256 aa)    
Predicted Functional Partners:
ANKS6
Ankyrin repeat and sterile alpha motif domain containing 6.
    
 
0.868
NEK7
Serine/threonine-protein kinase Nek7; Belongs to the protein kinase superfamily.
    
 
 0.596
E4F1
E4F transcription factor 1.
   
  0.574
LRRC45
Leucine-rich repeat-containing protein 45.
   
    0.559
NEK6
NIMA related kinase 6; Belongs to the protein kinase superfamily.
    
 
 0.518
NEK8
Serine/threonine-protein kinase Nek8.
    
 0.496
IFT88
Intraflagellar transport 88.
   
 0.441
ENSCJAP00000056911
SH3 domain-containing protein.
    
 0.439
IFT81
Intraflagellar transport protein 81 homolog isoform 1.
    
 0.429
NPHP3
TPR_REGION domain-containing protein.
   
 0.427
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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