ENSCJAP00000072617 protein (Callithrix jacchus)

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Score

ENSCJAP00000072617

Uncharacterized protein. (145 aa)

Predicted Functional Partners:

PRPF39

0.660

NCBP2

0.640

NCBP1

0.625

SF3B1

0.606

RBM25

0.598

SNRPC

0.594

SNRPC-2

0.594

U2AF2

0.590

SNRPD1

0.590

SNRNP35

0.584

Your Current Organism:

Callithrix jacchus

NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCJAP00000072617	NCBP1	ENSCJAP00000072617	ENSCJAP00000020106	Uncharacterized protein.	Nuclear cap-binding protein subunit 1.	0.625
ENSCJAP00000072617	NCBP2	ENSCJAP00000072617	ENSCJAP00000063240	Uncharacterized protein.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.640
ENSCJAP00000072617	PRPF39	ENSCJAP00000072617	ENSCJAP00000029474	Uncharacterized protein.	Pre-mRNA-processing factor 39.	0.660
ENSCJAP00000072617	RBM25	ENSCJAP00000072617	ENSCJAP00000048670	Uncharacterized protein.	RNA binding motif protein 25.	0.598
ENSCJAP00000072617	SF3B1	ENSCJAP00000072617	ENSCJAP00000007188	Uncharacterized protein.	Splicing factor 3B subunit 1 isoform 1.	0.606
ENSCJAP00000072617	SNRNP35	ENSCJAP00000072617	ENSCJAP00000013246	Uncharacterized protein.	Small nuclear ribonucleoprotein U11/U12 subunit 35.	0.584
ENSCJAP00000072617	SNRPC	ENSCJAP00000072617	ENSCJAP00000028213	Uncharacterized protein.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...]	0.594
ENSCJAP00000072617	SNRPC-2	ENSCJAP00000072617	ENSCJAP00000044785	Uncharacterized protein.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...]	0.594
ENSCJAP00000072617	SNRPD1	ENSCJAP00000072617	ENSCJAP00000068431	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA.	0.590
ENSCJAP00000072617	U2AF2	ENSCJAP00000072617	ENSCJAP00000031483	Uncharacterized protein.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.590
NCBP1	ENSCJAP00000072617	ENSCJAP00000020106	ENSCJAP00000072617	Nuclear cap-binding protein subunit 1.	Uncharacterized protein.	0.625
NCBP1	NCBP2	ENSCJAP00000020106	ENSCJAP00000063240	Nuclear cap-binding protein subunit 1.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.999
NCBP1	PRPF39	ENSCJAP00000020106	ENSCJAP00000029474	Nuclear cap-binding protein subunit 1.	Pre-mRNA-processing factor 39.	0.893
NCBP1	RBM25	ENSCJAP00000020106	ENSCJAP00000048670	Nuclear cap-binding protein subunit 1.	RNA binding motif protein 25.	0.953
NCBP1	SF3B1	ENSCJAP00000020106	ENSCJAP00000007188	Nuclear cap-binding protein subunit 1.	Splicing factor 3B subunit 1 isoform 1.	0.894
NCBP1	SNRNP35	ENSCJAP00000020106	ENSCJAP00000013246	Nuclear cap-binding protein subunit 1.	Small nuclear ribonucleoprotein U11/U12 subunit 35.	0.870
NCBP1	SNRPC	ENSCJAP00000020106	ENSCJAP00000028213	Nuclear cap-binding protein subunit 1.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...]	0.856
NCBP1	SNRPC-2	ENSCJAP00000020106	ENSCJAP00000044785	Nuclear cap-binding protein subunit 1.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...]	0.856
NCBP1	SNRPD1	ENSCJAP00000020106	ENSCJAP00000068431	Nuclear cap-binding protein subunit 1.	Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA.	0.970
NCBP1	U2AF2	ENSCJAP00000020106	ENSCJAP00000031483	Nuclear cap-binding protein subunit 1.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.856