STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCJAP00000072890Uncharacterized protein. (364 aa)    
Predicted Functional Partners:
DDX6
Putative ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family.
   
 
 0.897
EIF4ENIF1
Eukaryotic translation initiation factor 4E nuclear import factor 1 (Predicted).
   
 
 0.820
KIFBP
KIF1-binding protein.
   
 
 0.793
DCP2
M7GpppN-mRNA hydrolase isoform 1.
   
 
 0.763
EDC3
Enhancer of mRNA-decapping protein 3.
    
 
 0.714
DCP1A
mRNA-decapping enzyme 1A.
    
 
 0.644
DCP1B
Decapping mRNA 1B.
    
 
 0.644
APOA1BP
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX.
    
 
 0.565
EDC4
Enhancer of mRNA-decapping protein 4.
    
 
 0.477
LSM1
U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation.
    
 
 0.465
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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