STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFCAB2EF-hand calcium binding domain 2. (162 aa)    
Predicted Functional Partners:
GIN1
Gypsy retrotransposon integrase 1.
   
 
 0.660
CASK
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.657
GALNT2
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.644
TAX1BP1
Tax1 binding protein 1.
    
 0.612
CCM2
CCM2 scaffold protein.
    
 0.604
EFCAB11
EF-hand calcium-binding domain-containing protein 11.
      
 0.516
TTLL7
Tubulin tyrosine ligase like 7.
      
 0.499
CCM2L
CCM2 like scaffold protein.
    
 0.492
MYO9B
Myosin IXB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.481
MYO9A
Myosin IXA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.481
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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