STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCJAP00000073487Uncharacterized protein. (364 aa)    
Predicted Functional Partners:
AIM2
Absent in melanoma 2.
    
 0.926
CASP1
Uncharacterized protein; Belongs to the peptidase C14A family.
   
 0.925
F7I1B4_CALJA
CARD domain-containing protein.
   
 0.925
MEFV
Pyrin domain-containing protein.
    
0.880
NLRP3
NLR family pyrin domain containing 3.
   
 0.875
CASP4
Caspase 4; Belongs to the peptidase C14A family.
   
 0.849
CARD16
Caspase recruitment domain family member 16.
   
 0.846
CASP8
Caspase 8; Belongs to the peptidase C14A family.
   
 0.785
IL1B
Multifunctional fusion protein; Potent proinflammatory cytokine. Initially discovered as the major endogenous pyrogen, induces prostaglandin synthesis, neutrophil influx and activation, T-cell activation and cytokine production, B- cell activation and antibody production, and fibroblast proliferation and collagen production; Belongs to the IL-1 family.
   
 
 0.765
CARD18
Caspase recruitment domain family member 18.
   
 0.746
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.