STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNAAF1Dynein assembly factor 1, axonemal. (765 aa)    
Predicted Functional Partners:
CCDC40
Coiled-coil domain containing 40.
    
 
 0.765
DNAH11
Dynein axonemal heavy chain 11.
   
 
 0.749
CCDC39
Coiled-coil domain containing 39.
    
 
 0.703
DNALI1
Dynein axonemal light intermediate chain 1.
   
  
 0.670
DNAH5
Dynein axonemal heavy chain 5.
   
 
 0.664
DNAI2
Dynein axonemal intermediate chain 2.
    
 
 0.650
DNAI1
Dynein axonemal intermediate chain 1.
    
 
 0.649
RSPH9
Radial spoke head protein 9 homolog isoform 1.
   
 0.648
CFAP43
Cilia and flagella associated protein 43.
   
  
 0.646
ARMC4
Armadillo repeat-containing protein 4.
      
 0.617
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.