STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCAMBasal cell adhesion molecule (Lutheran blood group). (627 aa)    
Predicted Functional Partners:
NECTIN2
Poliovirus receptor-related protein 2 isoform delta.
 
  
 0.618
AFDN
Afadin, adherens junction formation factor.
    
 0.592
CASK
Uncharacterized protein; Belongs to the MAGUK family.
    
  0.506
LAMA3
Laminin subunit alpha 3.
   
 
 0.502
PECAM1
Platelet and endothelial cell adhesion molecule 1.
   
 0.479
CNTN6
Contactin 6.
    
0.477
PVR
PVR cell adhesion molecule.
 
  
 0.450
NAT14
N-acetyltransferase 14 (putative).
  
     0.443
NT5E
5'-nucleotidase ecto; Belongs to the 5'-nucleotidase family.
   
  
 0.419
CCDC106
Coiled-coil domain containing 106.
  
     0.418
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.