STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRAMD1BGRAM domain containing 1B. (911 aa)    
Predicted Functional Partners:
ACAA1
3-ketoacyl-CoA thiolase, peroxisomal isoform a; Belongs to the thiolase-like superfamily. Thiolase family.
      
 0.580
STARD3
StAR related lipid transfer domain containing 3.
      
 0.567
LYZ
Lysozyme C; Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents; Belongs to the glycosyl hydrolase 22 family.
      
 0.565
SCN2B
Sodium voltage-gated channel beta subunit 2.
    
 0.552
JAML
Uncharacterized protein.
    
 0.552
NPC1L1
NPC1 like intracellular cholesterol transporter 1.
      
 0.527
HMX3
Homeobox domain-containing protein.
      
 0.517
TRAPPC10
Trafficking protein particle complex subunit 10.
    
 
 0.515
DUOX2
Dual oxidase 2.
     
 0.514
KLRB1
Killer cell lectin like receptor B1.
    
 
 0.506
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.