STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFSP1Inactive Ufm1-specific protease 1. (142 aa)    
Predicted Functional Partners:
UFM1
Ubiquitin fold modifier 1.
    
 
 0.854
ENSCJAP00000055833
Uncharacterized protein.
    
 
 0.854
UBA5
Ubiquitin-like modifier-activating enzyme 5 isoform 1.
  
   
 0.629
UFL1
UFM1 specific ligase 1.
   
  
 0.562
UFC1
Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage.
  
  
 0.528
ODR4
Odr-4 GPCR localization factor homolog.
   
 
 0.527
ENSCJAP00000065036
Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage.
  
  
 0.523
HSPA12A
Heat shock protein family A (Hsp70) member 12A.
      
 0.516
DDRGK1
DDRGK domain containing 1.
    
 
 0.505
CDK5RAP3
CDK5 regulatory subunit-associated protein 3.
   
  
 0.405
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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