STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTP4A2Protein tyrosine phosphatase 4A2. (170 aa)    
Predicted Functional Partners:
CNNM3
Cyclin and CBS domain divalent metal cation transport mediator 3.
    
 
 0.944
RABGGTB
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 0.668
CNNM2
Cyclin and CBS domain divalent metal cation transport mediator 2.
    
 
 0.644
PTS
6-pyruvoyltetrahydropterin synthase.
      
 0.547
ENSCJAP00000074562
TYR_PHOSPHATASE_2 domain-containing protein.
  
 
 
0.543
PTP4A1
Protein tyrosine phosphatase type IVA 1.
  
 
 
0.540
NR2F6
Nuclear receptor subfamily 2 group F member 6.
   
  
 0.525
PAQR9
Progestin and adipoQ receptor family member 9.
      
 0.509
PLCL2
Phosphoinositide phospholipase C.
   
  
 0.507
SPINK2
Serine peptidase inhibitor, Kazal type 2.
   
    0.487
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.