STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCJAP00000074146Uncharacterized protein. (90 aa)    
Predicted Functional Partners:
MTREX
Superkiller viralicidic activity 2-like 2.
    
 
 0.881
SKIV2L
Ski2 like RNA helicase.
    
 
 0.635
PAPOLA
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 
 0.625
PAPOLG
Poly(A) polymerase gamma.
   
 
 0.625
ENSCJAP00000066280
Uncharacterized protein.
   
 
 0.625
PAPOLB
Uncharacterized protein.
   
 
 0.625
ENSCJAP00000076000
Uncharacterized protein.
   
 
 0.625
DDX60
DExD/H-box helicase 60.
    
 
 0.581
DDX60L
DExD/H-box 60 like.
    
 
 0.581
IPO7
Importin-7.
    
 
 0.581
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.