STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIGO3Amphoterin-induced protein 3. (504 aa)    
Predicted Functional Partners:
TMEM131
Transmembrane protein 131.
      
 0.834
ZDHHC14
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.814
LPHN1
Adhesion G protein-coupled receptor L1; Belongs to the G-protein coupled receptor 2 family.
    
   0.739
ADGRL2
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
    
   0.739
ADGRL3
Adhesion G protein-coupled receptor L3; Belongs to the G-protein coupled receptor 2 family.
    
   0.739
SH3BP2
SH3 domain binding protein 2.
      
 0.725
CYTH2
Uncharacterized protein.
      
 0.725
GMPPB
GDP-mannose pyrophosphorylase B.
 
 
    0.618
N6AMT1
N-6 adenine-specific DNA methyltransferase 1.
      
 0.611
FAM3B
Family with sequence similarity 3 member B.
      
 0.580
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.