STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDI1DNA damage inducible 1 homolog 1. (394 aa)    
Predicted Functional Partners:
RSC1A1
Regulator of solute carriers 1.
 
  
 
 0.976
AASDH
Aminoadipate-semialdehyde dehydrogenase.
   
 
 0.826
RNF181
E3 ubiquitin-protein ligase RNF181.
      
 0.712
ULK2
Unc-51 like autophagy activating kinase 2.
    
 
 0.679
ULK1
Unc-51 like autophagy activating kinase 1.
    
 
 0.679
UBE3C
Ubiquitin-protein ligase E3C.
   
  
 0.628
ENSCJAP00000070348
Uncharacterized protein.
    
 0.605
NRIP3
Asp_protease domain-containing protein.
   
  
0.572
TDP1
Tyrosyl-DNA phosphodiesterase 1.
      
 0.566
HUWE1
HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1.
      
 0.509
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.