STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SETD4SET domain-containing protein 4 isoform 1. (440 aa)    
Predicted Functional Partners:
ZNF280B
Zinc finger protein 280B.
    
 0.867
SLC37A3
Sugar phosphate exchanger 3 isoform 1.
      
 0.864
SLC5A7
High affinity choline transporter 1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
   
  
 0.847
PCDH9
Protocadherin 9.
      
 0.845
DYNC1LI1
Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.
   
  
 0.804
PPP1R10
Protein phosphatase 1 regulatory subunit 10.
    
 0.800
ST6GAL2
Beta-galactoside alpha-2,6-sialyltransferase 2 isoform a; Belongs to the glycosyltransferase 29 family.
      
 0.783
KDM7A
Lysine demethylase 7A.
      
 0.740
KCNJ12
ATP-sensitive inward rectifier potassium channel 12.
      
 0.739
TIMD4
T cell immunoglobulin and mucin domain containing 4.
      
 0.727
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.