STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCJAP00000074740VKc domain-containing protein. (203 aa)    
Predicted Functional Partners:
GGCX
Gamma-glutamyl carboxylase.
   
  
 0.661
XPR1
Xenotropic and polytropic retrovirus receptor 1.
      
 0.550
PROS1
Vitamin K-dependent protein S preproprotein.
   
  
 0.541
TRPT1
tRNA phosphotransferase 1.
   
  
 0.518
CYP2C8-2
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
  
 0.516
MGP
Matrix Gla protein; Associates with the organic matrix of bone and cartilage.
      
 0.497
F2
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
    
 
 0.476
TPMT
Thiopurine S-methyltransferase.
      
 0.457
EPAS1
Endothelial PAS domain protein 1.
   
  
 0.453
CYP2C8
Cytochrome P450 family 2 subfamily C member 8.
   
  
 0.450
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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