STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCJAP00000074887Ral GTPase activating protein catalytic alpha subunit 1. (2495 aa)    
Predicted Functional Partners:
GRAMD1A
GRAM domain containing 1A.
   
  
 0.781
MIER1
Mesoderm induction early response protein 1 isoform b.
   
  
 0.774
CHSY3
Hexosyltransferase.
      
 0.774
RALGAPB
Ral GTPase activating protein non-catalytic beta subunit.
   
0.761
MASP1
Mannan binding lectin serine peptidase 1; Belongs to the peptidase S1 family.
      
 0.686
FAM91A1
Family with sequence similarity 91 member A1.
     
 0.651
RPAP2
RNA polymerase II associated protein 2.
   
  
 0.638
CHSY1
Hexosyltransferase.
      
 0.620
CLCN3
Chloride channel protein.
      
 0.569
COL6A2
Uncharacterized protein.
      
 0.503
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.