STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HAND2Heart and neural crest derivatives expressed 2. (217 aa)    
Predicted Functional Partners:
GATA4
GATA binding protein 4.
   
 0.894
TBX5
T-box transcription factor TBX5 isoform 1.
   
 0.856
NKX2-5
NK2 homeobox 5.
   
 
 0.809
MEF2C
Myocyte-specific enhancer factor 2C isoform 3.
    
 
 0.746
TBX20
T-box transcription factor 20.
   
  
 0.707
MYOCD
Myocardin isoform 1.
   
  
 0.699
PHOX2B
Paired like homeobox 2B.
   
 
 0.675
TCF3
Transcription factor 3.
   
 0.617
PHOX2A
Paired like homeobox 2A.
   
 
 0.608
GATA3
GATA binding protein 3.
   
 0.604
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.