STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCHL3Ubiquitin carboxyl-terminal hydrolase. (294 aa)    
Predicted Functional Partners:
ENSCJAP00000059313
Uncharacterized protein.
    
 0.908
UBC
Uncharacterized protein.
    
 0.867
UBA52
Ubiquitin-like domain-containing protein.
    
 0.829
OTUD6A
OTU deubiquitinase 6A.
      
 0.827
LOC100411827
Ubiquitin-like domain-containing protein.
    
 0.755
PSMD4
26S proteasome non-ATPase regulatory subunit 4.
     
 0.745
HSBP1
Uncharacterized protein.
      
 0.729
HSBP1L1
Heat shock factor-binding protein 1-like protein 1.
      
 0.729
F7I685_CALJA
Ubiquitin-like domain-containing protein.
   
 0.718
NEDD8
Ubiquitin-like domain-containing protein.
   
 0.718
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.