SPATA17 protein (Callithrix jacchus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

SPATA17

Uncharacterized protein. (360 aa)

Predicted Functional Partners:

LRGUK

0.580

RAB25

0.544

RAB11B

0.544

RABL2B

0.544

RAB11A

0.544

EXOC4

0.517

SPATA20

0.457

KCTD3

0.456

EXOC6B

0.453

EXOC6

0.453

Your Current Organism:

Callithrix jacchus

NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EXOC4	EXOC6	ENSCJAP00000022278	ENSCJAP00000016065	Exocyst complex component 4 isoform a.	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	0.982
EXOC4	EXOC6B	ENSCJAP00000022278	ENSCJAP00000006999	Exocyst complex component 4 isoform a.	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	0.973
EXOC4	RAB11A	ENSCJAP00000022278	ENSCJAP00000063789	Exocyst complex component 4 isoform a.	Ras-related protein Rab-11A isoform 1.	0.758
EXOC4	RAB11B	ENSCJAP00000022278	ENSCJAP00000019878	Exocyst complex component 4 isoform a.	RAB11B, member RAS oncogene family.	0.758
EXOC4	RAB25	ENSCJAP00000022278	ENSCJAP00000014329	Exocyst complex component 4 isoform a.	RAB25, member RAS oncogene family.	0.681
EXOC4	RABL2B	ENSCJAP00000022278	ENSCJAP00000034142	Exocyst complex component 4 isoform a.	Rab-like protein 2B isoform 1.	0.681
EXOC4	SPATA17	ENSCJAP00000022278	ENSCJAP00000075234	Exocyst complex component 4 isoform a.	Uncharacterized protein.	0.517
EXOC6	EXOC4	ENSCJAP00000016065	ENSCJAP00000022278	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Exocyst complex component 4 isoform a.	0.982
EXOC6	EXOC6B	ENSCJAP00000016065	ENSCJAP00000006999	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	0.529
EXOC6	RAB11A	ENSCJAP00000016065	ENSCJAP00000063789	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Ras-related protein Rab-11A isoform 1.	0.693
EXOC6	RAB11B	ENSCJAP00000016065	ENSCJAP00000019878	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	RAB11B, member RAS oncogene family.	0.693
EXOC6	RAB25	ENSCJAP00000016065	ENSCJAP00000014329	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	RAB25, member RAS oncogene family.	0.603
EXOC6	RABL2B	ENSCJAP00000016065	ENSCJAP00000034142	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Rab-like protein 2B isoform 1.	0.603
EXOC6	SPATA17	ENSCJAP00000016065	ENSCJAP00000075234	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Uncharacterized protein.	0.453
EXOC6B	EXOC4	ENSCJAP00000006999	ENSCJAP00000022278	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Exocyst complex component 4 isoform a.	0.973
EXOC6B	EXOC6	ENSCJAP00000006999	ENSCJAP00000016065	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	0.529
EXOC6B	RAB11A	ENSCJAP00000006999	ENSCJAP00000063789	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Ras-related protein Rab-11A isoform 1.	0.692
EXOC6B	RAB11B	ENSCJAP00000006999	ENSCJAP00000019878	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	RAB11B, member RAS oncogene family.	0.692
EXOC6B	RAB25	ENSCJAP00000006999	ENSCJAP00000014329	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	RAB25, member RAS oncogene family.	0.603
EXOC6B	RABL2B	ENSCJAP00000006999	ENSCJAP00000034142	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Rab-like protein 2B isoform 1.	0.603