STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF536Zinc finger protein 536. (1384 aa)    
Predicted Functional Partners:
FAM181B
Family with sequence similarity 181 member B.
      
 0.516
ZNF521
Zinc finger protein 521.
    
 
0.511
GATAD2B
GATA zinc finger domain containing 2B.
    
 0.508
ZNF423
Zinc finger protein 423.
    
 
0.482
USH1C
USH1 protein network component harmonin.
    
 
 0.469
UCMA
Upper zone of growth plate and cartilage matrix associated.
     
 0.465
GATAD2A
GATA zinc finger domain containing 2A.
    
 0.460
FBXO2
F-box protein 2.
      
 0.454
FIBIN
Fin bud initiation factor homolog.
      
 0.451
DISP3
Dispatched RND transporter family member 3.
      
 0.451
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.