STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DLEC1DLEC1 cilia and flagella associated protein. (1779 aa)    
Predicted Functional Partners:
CFAP161
Cilia and flagella associated protein 161.
   
 0.613
RSPH14
Rhabdoid tumor deletion region protein 1.
    
 
 0.613
LRRC23
Leucine rich repeat containing 23.
   
 0.610
TCHHL1
Trichohyalin like 1.
   
 0.603
CCDC146
Coiled-coil domain containing 146.
    
 0.582
LRRC34
Leucine rich repeat containing 34.
    
 0.580
TSNAXIP1
Translin associated factor X interacting protein 1.
   
 0.556
CFAP52
Cilia and flagella associated protein 52.
   
 0.552
SPATA18
Spermatogenesis associated 18.
      
 0.543
CCDC65
Coiled-coil domain containing 65.
   
 
 0.537
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.