STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM50AUncharacterized protein. (442 aa)    
Predicted Functional Partners:
SLU7
SLU7 homolog, splicing factor.
   
 
  0.668
ALYREF
Aly/REF export factor.
   
  0.655
CDC40
Cell division cycle 40.
   
 
  0.629
PRKRIP1
PRKR interacting protein 1.
   
 
 0.601
CWC22
MIF4G domain-containing protein.
    
  0.590
SDE2
SDE2 telomere maintenance homolog.
     
 0.582
NKAPL
NFKB activating protein like.
   
 
  0.578
NKAP
NF-kappa-B-activating protein.
   
 
  0.578
C1H9orf78
Uncharacterized protein C9orf78.
    
 0.569
ENSCJAP00000056834
Uncharacterized protein.
    
 0.569
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.