STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FEM1CProtein fem-1 homolog C. (617 aa)    
Predicted Functional Partners:
UBXN7
UBX domain-containing protein 7.
    
 0.906
CUL2
Cullin 2; Belongs to the cullin family.
    
 0.870
RBX1
E3 ubiquitin-protein ligase RBX1.
    
 0.694
TCEB2
Transcription elongation factor B polypeptide 2 isoform a.
    
 0.637
PAK3
P21 (RAC1) activated kinase 3.
    
 0.567
FEM1B
Protein fem-1 homolog B.
  
  
 
0.560
ENSCJAP00000073823
Zf-rbx1 domain-containing protein.
    
 0.542
COMMD8
COMM domain containing 8.
   
  0.514
DCUN1D1
DCN1-like protein.
    
 0.512
KLHDC10
Uncharacterized protein.
   
 0.499
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.