STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IQUBIQ motif and ubiquitin domain containing. (830 aa)    
Predicted Functional Partners:
ARMC3
Armadillo repeat containing 3.
   
 
 0.746
ARMC4
Armadillo repeat-containing protein 4.
  
 
 0.681
C9orf116
Chromosome 9 open reading frame 116.
    
 
 0.647
C4orf47
Chromosome 4 open reading frame 47.
      
 0.645
ANKRD42
Ankyrin repeat domain 42.
   
 
 0.620
ASB15
Ankyrin repeat and SOCS box protein 15.
   
 
 0.599
EFCAB1
EF-hand calcium binding domain 1.
   
 0.584
ENSCJAP00000076871
Uncharacterized protein.
   
 0.584
DNALI1
Dynein axonemal light intermediate chain 1.
   
 
 0.581
TMEM79
Transmembrane protein 79.
      
 0.570
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.