STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFRSF10DUncharacterized protein. (406 aa)    
Predicted Functional Partners:
TNFSF10
Tumor necrosis factor ligand superfamily member.
     
 0.919
FADD
Fas associated via death domain.
    
 0.793
HEATR4
Uncharacterized protein.
      
 0.782
FAM171A1
Family with sequence similarity 171 member A1.
      
 0.780
CAMKK1
Calcium/calmodulin dependent protein kinase kinase 1.
      
 0.721
CASP8
Caspase 8; Belongs to the peptidase C14A family.
    
 0.695
FASLG
Fas ligand; Belongs to the tumor necrosis factor family.
    
 0.640
OPCML
Opioid-binding protein/cell adhesion molecule isoform a preproprotein.
    
 
 0.639
DUSP7
Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.
   
  
 0.636
RIPK1
Receptor-interacting serine/threonine-protein kinase 1.
    
 0.614
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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