STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RASSF7Ras association domain family member 7. (378 aa)    
Predicted Functional Partners:
PPP1R13B
Protein phosphatase 1 regulatory subunit 13B.
    
 
 0.612
RASA2
RAS p21 protein activator 2.
   
  
 0.544
IL10RB
Uncharacterized protein.
    
 
 0.539
TP53BP2
Tumor protein p53 binding protein 2.
    
 
 0.539
FRMD6
FERM domain containing 6.
    
 
 0.535
LZTS1
Leucine zipper putative tumor suppressor 1.
      
 0.521
PARD3
Partitioning defective 3 homolog isoform 1.
    
 
 0.520
RASSF6
Ras association domain family member 6.
   
  
 0.506
PDZD4
PDZ domain containing 4.
   
  
 0.497
CCDC102B
Coiled-coil domain containing 102B.
      
 0.497
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.