STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SH3YL1SH3 and SYLF domain containing 1. (381 aa)    
Predicted Functional Partners:
WAS
WASP actin nucleation promoting factor.
    
 
 0.826
WASL
WASP like actin nucleation promoting factor.
    
 
 0.826
MVK
Mevalonate kinase.
    
   0.794
SH3D19
SH3 domain containing 19.
   
  
0.665
SMAP2
Stromal membrane-associated protein 2 isoform 1.
    
 
 0.599
NBR1
NBR1 autophagy cargo receptor.
   
  
 0.598
ARHGEF38
Rho guanine nucleotide exchange factor 38.
    
 
 0.524
GFPT1
Glutamine--fructose-6-phosphate transaminase 1.
   
    0.489
GFPT2
Glutamine-fructose-6-phosphate transaminase 2.
   
    0.489
TMEM53
Transmembrane protein 53.
      
 0.483
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.