STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC22A18Solute carrier family 22 member 18. (593 aa)    
Predicted Functional Partners:
PHLDA2
Pleckstrin homology like domain family A member 2.
      
 0.826
SLC22A31
Solute carrier family 22 member 31.
   
  
 0.818
F6QGQ9_CALJA
Solute carrier family 22 member 23.
   
  
 0.818
SLC22A10
Solute carrier family 22 member 10.
   
  
 0.747
CDKN1C
Uncharacterized protein.
      
 0.739
TSSC4
Tumor suppressing subtransferable candidate 4.
      
 0.715
SLC22A17
Uncharacterized protein.
   
  
 0.687
OSBPL5
Oxysterol-binding protein; Belongs to the OSBP family.
   
  
 0.650
PKNOX2
PBX/knotted 1 homeobox 2.
      
 0.646
SLC22A11
Uncharacterized protein.
   
  
 0.628
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.