STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PUDPPseudouridine 5'-phosphatase. (261 aa)    
Predicted Functional Partners:
PGGHG
Protein-glucosylgalactosylhydroxylysine glucosidase.
  
 
 0.879
AGXT
Serine--pyruvate aminotransferase, mitochondrial; Dual metabolic roles of gluconeogenesis (in the mitochondria) and glyoxylate detoxification (in the peroxisomes).
    
 0.855
GPI
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.795
YIPF6
Protein YIPF.
  
 
 0.764
ADHFE1
Hydroxyacid-oxoacid transhydrogenase, mitochondrial.
    
 0.708
MPI
Mannose-6-phosphate isomerase.
   
 0.668
PGM3
Phosphoacetylglucosamine mutase; Catalyzes the conversion of GlcNAc-6-P into GlcNAc-1-P during the synthesis of uridine diphosphate/UDP-GlcNAc, a sugar nucleotide critical to multiple glycosylation pathways including protein N- and O- glycosylation; Belongs to the phosphohexose mutase family.
  
 0.660
ASMTL
Acetylserotonin O-methyltransferase like.
  
  
 0.653
PGM2L1
Glucose 1,6-bisphosphate synthase.
  
 0.651
PGM2
Phosphoglucomutase 2.
  
 0.651
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.