STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCJAP00000077074ANK_REP_REGION domain-containing protein. (1052 aa)    
Predicted Functional Partners:
PPP6C
Serine/threonine-protein phosphatase.
    
  0.746
PPP6R2
Protein phosphatase 6 regulatory subunit 2.
    
 0.725
PPP6R1
Serine/threonine-protein phosphatase 6 regulatory subunit 1.
    
 0.686
PPP6R3
Protein phosphatase 6 regulatory subunit 3.
    
 0.596
ANKRD44
Ankyrin repeat domain 44.
  
 
 
0.567
IFT81
Intraflagellar transport protein 81 homolog isoform 1.
    
 0.429
USP10
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
   
   0.417
IFT22
Rab-like protein 5 isoform a.
    
 0.413
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.