STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCJAP00000077154Uncharacterized protein. (307 aa)    
Predicted Functional Partners:
LETM2
Leucine zipper and EF-hand containing transmembrane protein 2.
 
      0.701
RPL18
Ribosomal protein L18.
    
   0.459
RPS16
Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
    
   0.459
RPS3
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
    
   0.459
RPL11
60S ribosomal protein L11 isoform 1; Belongs to the universal ribosomal protein uL5 family.
    
   0.456
ENSCJAP00000072852
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
    
   0.456
RHOG
Rho-related GTP-binding protein RhoG.
    
 0.451
MRPL45
39S ribosomal protein L45, mitochondrial.
   
 
 0.428
TRAPPC10
Trafficking protein particle complex subunit 10.
      
 0.400
PCGF3
Uncharacterized protein.
      
 0.400
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (22%) [HD]