STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LETM2Leucine zipper and EF-hand containing transmembrane protein 2. (562 aa)    
Predicted Functional Partners:
ENSCJAP00000077154
Uncharacterized protein.
 
      0.701
FAM118A
Family with sequence similarity 118 member A.
    
 
 0.582
RHBDD3
Rhomboid domain-containing protein 3.
      
 0.581
PLD6
Phospholipase D family member 6.
      
 0.538
REEP6
Receptor expression-enhancing protein.
      
 0.528
BRF2
Uncharacterized protein.
    
 
 0.526
DNAJC18
DnaJ homolog subfamily C member 18.
   
 
 0.475
GPAT2
Glycerol-3-phosphate acyltransferase 2, mitochondrial.
      
 0.463
RPL18
Ribosomal protein L18.
    
   0.459
RPS16
Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
    
   0.459
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.