STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSPO3R-spondin-3. (273 aa)    
Predicted Functional Partners:
LGR4
Leucine-rich repeat-containing G-protein coupled receptor 4.
   
 0.983
LGR5
Leucine-rich repeat-containing G-protein coupled receptor 5.
   
 0.981
ZNRF3
Zinc and ring finger 3.
   
 0.978
LGR6
Leucine rich repeat containing G protein-coupled receptor 6.
    
 0.958
RNF43
E3 ubiquitin-protein ligase RNF43.
   
 0.753
TGFBR3
Transforming growth factor beta receptor type 3 isoform a.
   
 0.605
RSPO1
R-spondin 1.
  
  
0.585
RSPO4
R-spondin 4.
  
  
0.584
APCDD1
APC down-regulated 1.
     
 0.579
LIX1
Protein limb expression 1 homolog.
      
 0.564
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.