STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFRSF19TNF receptor superfamily member 19. (423 aa)    
Predicted Functional Partners:
RTN4R
Reticulon 4 receptor.
      
 0.645
LINGO1
Leucine rich repeat and Ig domain containing 1.
      
 0.645
OMG
Oligodendrocyte-myelin glycoprotein.
      
 0.581
IFRD2
Uncharacterized protein.
      
 0.501
FBXW5
F-box and WD repeat domain containing 5.
      
 0.499
MAG
Myelin associated glycoprotein.
      
 0.477
NKD1
NKD inhibitor of WNT signaling pathway 1.
   
  
 0.476
SPOCK1
Testican-1.
      
 0.449
COL4A6
Collagen type IV alpha 6 chain.
      
 0.424
LGR5
Leucine-rich repeat-containing G-protein coupled receptor 5.
    
 
 0.417
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.