STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMX3Homeobox domain-containing protein. (360 aa)    
Predicted Functional Partners:
HINFP
Histone H4 transcription factor.
    
   0.758
F7H755_CALJA
Uncharacterized protein.
    
   0.758
PPP1R21
Protein phosphatase 1 regulatory subunit 21 isoform 1.
    
   0.758
DTNA
Dystrobrevin alpha.
   
   0.647
DTNB
Dystrobrevin.
   
   0.647
TBX1
T-box transcription factor 1.
    
 
 0.628
GRAMD1B
GRAM domain containing 1B.
      
 0.517
TBX22
T-box transcription factor 22.
    
 
 0.491
TBX20
T-box transcription factor 20.
    
 
 0.491
TBX18
T-box transcription factor 18.
    
 
 0.491
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.