STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYO7BMyosin VIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2141 aa)    
Predicted Functional Partners:
USH1C
USH1 protein network component harmonin.
   
 0.965
ANKS4B
Ankyrin repeat and sterile alpha motif domain containing 4B.
   
 0.921
USH1G
USH1 protein network component sans.
   
 0.917
WHRN
Whirlin.
    
 0.886
PDZD7
PDZ domain containing 7.
   
 0.832
LIMA1
LIM domain and actin binding 1.
   
  
 0.810
EXOG
Exo/endonuclease G.
      
 0.780
SULT1C2
Sulfotransferase; Belongs to the sulfotransferase 1 family.
   
  
 0.759
ATP1A4
Sodium/potassium-transporting ATPase subunit alpha.
      
 0.748
ENSCJAP00000056720
Espin.
   
 0.658
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.