STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCJAP00000078413Uncharacterized protein. (161 aa)    
Predicted Functional Partners:
SC5D
Sterol-C5-desaturase; Belongs to the sterol desaturase family.
   
 
 0.948
SQLE
Squalene epoxidase.
   
 
 0.936
HSD17B7
Hydroxysteroid 17-beta dehydrogenase 7.
   
 0.895
CYP51A1
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
 0.891
ENSCJAP00000070784
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
 0.891
SIGMAR1
Sigma non-opioid intracellular receptor 1 isoform 1.
   
 0.874
FDFT1
Farnesyl-diphosphate farnesyltransferase 1.
  
 
 0.869
ERG28
Putative ergosterol biosynthetic protein 28.
   
 
 0.844
NSDHL
NAD(P) dependent steroid dehydrogenase-like.
   
 0.794
CYP7B1
Cytochrome P450 family 7 subfamily B member 1; Belongs to the cytochrome P450 family.
   
 0.760
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.