STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCJAP00000078547Uncharacterized protein. (238 aa)    
Predicted Functional Partners:
CYC1
Cytochrome c1, heme protein, mitochondrial.
   
 0.916
UQCRB
Ubiquinol-cytochrome c reductase binding protein.
   
 0.915
UQCRQ
Ubiquinol-cytochrome c reductase complex III subunit VII.
   
 0.900
UQCRC1
Ubiquinol-cytochrome c reductase core protein 1.
   
 0.752
PMPCB
Mitochondrial-processing peptidase subunit beta; Belongs to the peptidase M16 family.
   
 0.752
F7HV18_CALJA
Uncharacterized protein; Belongs to the peptidase M16 family.
   
 0.752
LOC100389097
Cytochrome b-c1 complex subunit 2, mitochondrial.
   
 0.749
ENSCJAP00000060418
Peptidase_M16 domain-containing protein.
   
 0.749
ENSCJAP00000066484
Uncharacterized protein.
   
 0.749
IFNG
Interferon gamma; Produced by lymphocytes activated by specific antigens or mitogens. IFN-gamma, in addition to having antiviral activity, has important immunoregulatory functions. It is a potent activator of macrophages, it has antiproliferative effects on transformed cells and it can potentiate the antiviral and antitumor effects of the type I interferons; Belongs to the type II (or gamma) interferon family.
    
 0.744
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.