STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCJAP00000078577Uncharacterized protein. (326 aa)    
Predicted Functional Partners:
LOC100387926
Uncharacterized protein.
   
 0.793
CD47
CD47 molecule.
   
 0.729
CD79A
CD79a molecule.
   
 0.712
FCGR2A
Uncharacterized protein.
   
 0.698
CD79B
CD79b molecule.
   
 0.691
C1QC
Complement C1q subcomponent subunit C.
   
  0.666
VEGFA
Vascular endothelial growth factor A; Belongs to the PDGF/VEGF growth factor family.
    
 
 0.655
ENSCJAP00000074090
Ig-like domain-containing protein.
  
 0.650
CXCL8
Multifunctional fusion protein; Belongs to the intercrine alpha (chemokine CxC) family.
   
   0.626
Caja-DQA1
Ig-like domain-containing protein; Belongs to the MHC class II family.
   
  0.624
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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