STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYO7AMyosin VIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2215 aa)    
Predicted Functional Partners:
USH1C
USH1 protein network component harmonin.
   
 0.993
USH1G
USH1 protein network component sans.
   
 0.983
WHRN
Whirlin.
    
 0.955
CDH23
Cadherin related 23.
   
 0.912
VEZT
Vezatin, adherens junctions transmembrane protein.
   
 
 0.887
PCDH15
Protocadherin related 15.
   
 0.882
USH2A
Usherin.
    
 
 0.858
CIB2
Calcium and integrin-binding family member 2 isoform 1.
    
 0.825
CLRN1
Clarin 1.
      
 0.780
ANKS4B
Ankyrin repeat and sterile alpha motif domain containing 4B.
   
 0.766
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.