STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO84293.1Cell division protein FtsQ; Essential cell division protein. (254 aa)    
Predicted Functional Partners:
SDO84052.1
Hypothetical protein.
  
 
 0.983
SDO84084.1
Stage V sporulation protein D (sporulation-specific penicillin-binding protein).
 
 
 0.951
SDP35009.1
Penicillin-binding protein 2.
 
 
 0.947
murF
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
  
 
 0.934
SDP38143.1
Cell division protein FtsA.
  
 
 0.933
SDP51342.1
Cell division protein FtsB.
   
 
 0.923
SDO78096.1
Diol dehydratase reactivase alpha subunit.
  
 
 0.920
SDO84259.1
Cell division protein FtsW; Belongs to the SEDS family.
  
 
 0.912
SDO93939.1
Stage V sporulation protein D (sporulation-specific penicillin-binding protein).
  
 
 0.912
SDP81790.1
Cyanophycin synthetase.
  
  
 0.912
Your Current Organism:
Clostridium gasigenes
NCBI taxonomy Id: 94869
Other names: ATCC BAA-158, C. gasigenes, CIP 106517, Clostridium gasigenes Broda et al. 2000, DSM 12272, strain DB1A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.