SDO87890.1 protein (Clostridium gasigenes) - STRING interaction network

Nodes:

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

SDO87890.1

Toxin 50. (450 aa)

Predicted Functional Partners:

SDO87751.1

0.912

SDO87865.1

0.832

SDO87838.1

0.801

SDO87913.1

0.741

SDO87965.1

0.646

SDO76223.1

0.628

SDO87939.1

0.589

SDO88017.1

0.578

SDP10301.1

0.567

SDP11759.1

0.567

Your Current Organism:

Clostridium gasigenes

NCBI taxonomy Id: 94869
Other names: ATCC BAA-158, C. gasigenes, CIP 106517, Clostridium gasigenes Broda et al. 2000, DSM 12272, strain DB1A

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SDO76223.1	SDO87751.1	SAMN04488529_101347	SAMN04488529_101692	Phage terminase large subunit.	Phage terminase small subunit.	0.622
SDO76223.1	SDO87890.1	SAMN04488529_101347	SAMN04488529_101695	Phage terminase large subunit.	Toxin 50.	0.628
SDO76223.1	SDO87965.1	SAMN04488529_101347	SAMN04488529_101698	Phage terminase large subunit.	Phage minor structural protein GP20.	0.666
SDO87751.1	SDO76223.1	SAMN04488529_101692	SAMN04488529_101347	Phage terminase small subunit.	Phage terminase large subunit.	0.622
SDO87751.1	SDO87838.1	SAMN04488529_101692	SAMN04488529_101693	Phage terminase small subunit.	Phage terminase, large subunit, PBSX family.	0.958
SDO87751.1	SDO87865.1	SAMN04488529_101692	SAMN04488529_101694	Phage terminase small subunit.	Phage portal protein, SPP1 Gp6-like.	0.871
SDO87751.1	SDO87890.1	SAMN04488529_101692	SAMN04488529_101695	Phage terminase small subunit.	Toxin 50.	0.912
SDO87751.1	SDO87913.1	SAMN04488529_101692	SAMN04488529_101696	Phage terminase small subunit.	Hypothetical protein.	0.741
SDO87751.1	SDO87939.1	SAMN04488529_101692	SAMN04488529_101697	Phage terminase small subunit.	Hypothetical protein.	0.606
SDO87751.1	SDO87965.1	SAMN04488529_101692	SAMN04488529_101698	Phage terminase small subunit.	Phage minor structural protein GP20.	0.769
SDO87751.1	SDO88017.1	SAMN04488529_101692	SAMN04488529_101700	Phage terminase small subunit.	Phage major capsid protein E.	0.868
SDO87838.1	SDO87751.1	SAMN04488529_101693	SAMN04488529_101692	Phage terminase, large subunit, PBSX family.	Phage terminase small subunit.	0.958
SDO87838.1	SDO87865.1	SAMN04488529_101693	SAMN04488529_101694	Phage terminase, large subunit, PBSX family.	Phage portal protein, SPP1 Gp6-like.	0.787
SDO87838.1	SDO87890.1	SAMN04488529_101693	SAMN04488529_101695	Phage terminase, large subunit, PBSX family.	Toxin 50.	0.801
SDO87838.1	SDO87913.1	SAMN04488529_101693	SAMN04488529_101696	Phage terminase, large subunit, PBSX family.	Hypothetical protein.	0.741
SDO87838.1	SDO87939.1	SAMN04488529_101693	SAMN04488529_101697	Phage terminase, large subunit, PBSX family.	Hypothetical protein.	0.599
SDO87838.1	SDO87965.1	SAMN04488529_101693	SAMN04488529_101698	Phage terminase, large subunit, PBSX family.	Phage minor structural protein GP20.	0.634
SDO87838.1	SDO88017.1	SAMN04488529_101693	SAMN04488529_101700	Phage terminase, large subunit, PBSX family.	Phage major capsid protein E.	0.540
SDO87865.1	SDO87751.1	SAMN04488529_101694	SAMN04488529_101692	Phage portal protein, SPP1 Gp6-like.	Phage terminase small subunit.	0.871
SDO87865.1	SDO87838.1	SAMN04488529_101694	SAMN04488529_101693	Phage portal protein, SPP1 Gp6-like.	Phage terminase, large subunit, PBSX family.	0.787